BLASTP 1.4.10MP-WashU [29-Apr-96] [Build 22:25:52 May 19 1996]
Reference: Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers,
and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol.
215:403-10.
Query= gi|557844|sp|P40582|YIV8_YEAST HYPOTHETICAL 26.8 KD PROTEIN IN HYR1
3'REGION.
(234 letters)
Database: SWISS-PROT Release 34.0
59,021 sequences; 21,210,388 total letters.
Searching..................................................done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
sp|P40582|YIV8_YEAST HYPOTHETICAL 26.8 KD PROTEIN IN HYR1... 1211 2.0e-164 1
sp|P46429|GTS2_MANSE GLUTATHIONE S-TRANSFERASE 2 (EC 2.5.... 53 0.010 3
sp|P46420|GTH4_MAIZE GLUTATHIONE S-TRANSFERASE IV (EC 2.5... 70 0.14 1
sp|P41043|GTS2_DROME GLUTATHIONE S-TRANSFERASE 2 (EC 2.5.... 54 0.19 2
sp|P34345|YK67_CAEEL HYPOTHETICAL 28.5 KD PROTEIN C29E4.7... 50 0.42 2
sp|Q04522|GTH_SILCU GLUTATHIONE S-TRANSFERASE (EC 2.5.1.... 62 0.87 1
sp|P43329|HRPA_ECOLI ATP-DEPENDENT HELICASE HRPA. 41 0.98 5
sp|P30110|GTH1_WHEAT GLUTATHIONE S-TRANSFERASE 1 (EC 2.5.... 57 0.99 2
sp|P47496|DNLJ_MYCGE DNA LIGASE (EC 6.5.1.2) (POLYDEOXYRI... 60 0.991 1
sp|P32105|YIBF_ECOLI HYPOTHETICAL 22.6 KD PROTEIN IN SELA... 42 0.994 3
sp|P04907|GTH3_MAIZE GLUTATHIONE S-TRANSFERASE III (EC 2.... 58 0.9995 1
sp|P46437|GTS_MUSDO GLUTATHIONE S-TRANSFERASE (EC 2.5.1.... 48 0.9998 2
sp|P54232|VEF_GVHA VIRAL ENHANCING FACTOR (VEF) (ENHANC... 48 0.9998 2
>sp|P40582|YIV8_YEAST HYPOTHETICAL 26.8 KD PROTEIN IN HYR1 3'REGION.
Length = 234
Score = 1211 (558.4 bits), Expect = 2.0e-164, P = 2.0e-164
Identities = 234/234 (100%), Positives = 234/234 (100%)
Query: 1 MSLPIIKVHWLDHSRAFRLLWLLDHLNLEYEIVPYKRDANFRAPPELKKIHPLGRSPLLE 60
MSLPIIKVHWLDHSRAFRLLWLLDHLNLEYEIVPYKRDANFRAPPELKKIHPLGRSPLLE
Sbjct: 1 MSLPIIKVHWLDHSRAFRLLWLLDHLNLEYEIVPYKRDANFRAPPELKKIHPLGRSPLLE 60
Query: 61 VQDRETGKKKILAESGFIFQYVLQHFDHSHVLMSEDADIADQINYYLFYVEGSLQPPLMI 120
VQDRETGKKKILAESGFIFQYVLQHFDHSHVLMSEDADIADQINYYLFYVEGSLQPPLMI
Sbjct: 61 VQDRETGKKKILAESGFIFQYVLQHFDHSHVLMSEDADIADQINYYLFYVEGSLQPPLMI 120
Query: 121 EFILSKVKDSGMPFPISYLARKVADKISQAYSSGEVKNQFDFVEGEISKNNGYLVDGKLS 180
EFILSKVKDSGMPFPISYLARKVADKISQAYSSGEVKNQFDFVEGEISKNNGYLVDGKLS
Sbjct: 121 EFILSKVKDSGMPFPISYLARKVADKISQAYSSGEVKNQFDFVEGEISKNNGYLVDGKLS 180
Query: 181 GADILMSFPLQMAFERKFAAPEDYPAISKWLKTITSEESYAASKEKARALGSNF 234
GADILMSFPLQMAFERKFAAPEDYPAISKWLKTITSEESYAASKEKARALGSNF
Sbjct: 181 GADILMSFPLQMAFERKFAAPEDYPAISKWLKTITSEESYAASKEKARALGSNF 234
>sp|P46429|GTS2_MANSE GLUTATHIONE S-TRANSFERASE 2 (EC 2.5.1.18) (CLASS-SIGMA).
Length = 203
Score = 53 (24.4 bits), Expect = 0.010, Sum P(3) = 0.010
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 167 ISKNNGYLVDGKLSGADIL 185
I+KNNG+L G+L+ AD +
Sbjct: 136 ITKNNGFLALGRLTWADFV 154
Score = 46 (21.2 bits), Expect = 0.010, Sum P(3) = 0.010
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 45 PELKKIHPLGRSPLLEVQDRE 65
PE K P G+ P+LE+ ++
Sbjct: 39 PEFKPNTPFGQMPVLEIDGKK 59
Score = 36 (16.6 bits), Expect = 0.010, Sum P(3) = 0.010
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 202 EDYPAISKWLKTITSEESYAASKEKA 227
E YP K ++T+ S A + A
Sbjct: 173 EQYPIFKKPIETVLSNPKLKAYLDSA 198
>sp|P46420|GTH4_MAIZE GLUTATHIONE S-TRANSFERASE IV (EC 2.5.1.18) (GST-IV)
(GST-27) (CLASS PHI).
Length = 222
Score = 70 (32.3 bits), Expect = 0.15, P = 0.14
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 18 RLLWLLDHLNLEYEIVPYKRDANFRAPPELKKIHPLGRSPLLEVQDRETGKKKILA 73
R L L+ ++YE+VP R PE +P G+ P+LE D + + +A
Sbjct: 18 RALLALEEAGVDYELVPMSRQDGDHRRPEHLARNPFGKVPVLEDGDLTLFESRAIA 73
>sp|P41043|GTS2_DROME GLUTATHIONE S-TRANSFERASE 2 (EC 2.5.1.18) (CLASS-SIGMA).
Length = 247
Score = 54 (24.9 bits), Expect = 0.21, Sum P(2) = 0.19
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 35 YKRDANFRAPPELKKIHPLGRSPLLEVQDR 64
Y+ A+ R P LK P+G+ P+LEV +
Sbjct: 74 YEDVAHPRRVPALKPTMPMGQMPVLEVDGK 103
Score = 47 (21.7 bits), Expect = 0.21, Sum P(2) = 0.19
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 163 VEGEISKNNGYLVDGKLSGADI 184
+E + N+G+L GKL+ AD+
Sbjct: 177 LEQTVKDNDGHLALGKLTWADV 198
>sp|P34345|YK67_CAEEL HYPOTHETICAL 28.5 KD PROTEIN C29E4.7 IN CHROMOSOME III.
Length = 250
Score = 50 (23.1 bits), Expect = 0.54, Sum P(2) = 0.42
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 197 KFAAPEDYPAISKWLKTITSEE 218
+F E+YP ++KW + + S +
Sbjct: 198 EFPGEEEYPKLTKWFQKMISSD 219
Score = 48 (22.1 bits), Expect = 0.54, Sum P(2) = 0.42
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 70 KILAESGFIFQYVLQHFDHSHVLMSEDADIADQ 102
K++ ESGFI +Y+ F + +L ++ + Q
Sbjct: 81 KVVIESGFIPEYLDDAFPETRILPTDPYEKVQQ 113
>sp|Q04522|GTH_SILCU GLUTATHIONE S-TRANSFERASE (EC 2.5.1.18) (CLASS-PHI).
Length = 216
Score = 62 (28.6 bits), Expect = 2.1, P = 0.87
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 18 RLLWLLDHLNLEYEIVPYKRDANFRAPPELKKIHPLGRSPLLE 60
R+L L +LE+E VP A P ++P G+ P LE
Sbjct: 15 RVLVALYEKHLEFEFVPIDMGAGGHKQPSYLALNPFGQVPALE 57
>sp|P43329|HRPA_ECOLI ATP-DEPENDENT HELICASE HRPA.
Length = 1277
Score = 41 (18.9 bits), Expect = 3.8, Sum P(5) = 0.98
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 91 VLMSEDADIADQINYYLFYVEGSLQPPLMIEF 122
+L+ E A+ +++Y F+ +G+L+ L +F
Sbjct: 811 MLIKEGAEKISKLDYPNFWHQGNLKLRLSYQF 842
Score = 39 (18.0 bits), Expect = 3.8, Sum P(5) = 0.98
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 214 ITSEESYAASKEKARA 229
+ +EE +AA EK RA
Sbjct: 1105 VWTEEGFAALHEKVRA 1120
Score = 37 (17.1 bits), Expect = 3.8, Sum P(5) = 0.98
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 132 MPFPISYLARKVADK 146
+P PI YL K+ +K
Sbjct: 1055 IPSPIKYLHEKLPNK 1069
Score = 34 (15.7 bits), Expect = 3.8, Sum P(5) = 0.98
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 14 SRAFRLLWLLDHLN 27
S AFR L D+LN
Sbjct: 554 SNAFRRLCRTDYLN 567
Score = 34 (15.7 bits), Expect = 3.8, Sum P(5) = 0.98
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 59 LEVQDRETGKKKILAESGFIFQYVLQHFDH 88
+E + ++ ++ IL + +F++ Q H
Sbjct: 753 VEELEHKSRRRDILVDDETLFEFYDQRISH 782
Score = 34 (15.7 bits), Expect = 8.5, Sum P(5) = 1.0
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 123 ILSKVKDSGMPFPISYLARKV 143
+L++V++SG + I L R++
Sbjct: 859 LLNQVEESGFEWQIPGLRREL 879
>sp|P30110|GTH1_WHEAT GLUTATHIONE S-TRANSFERASE 1 (EC 2.5.1.18) (CLASS-PHI).
Length = 229
Score = 57 (26.3 bits), Expect = 4.2, Sum P(2) = 0.99
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 18 RLLWLLDHLNLEYEIVPYKRDANFRAPPELKKIHPLGRSP 57
R+L L+ + EYE+VP A P+ +++P + P
Sbjct: 17 RVLLFLEEVGAEYELVPMDFVAGEHKRPQHVQLNPFAKMP 56
Score = 34 (15.7 bits), Expect = 4.2, Sum P(2) = 0.99
Identities = 4/9 (44%), Positives = 6/9 (66%)
Query: 202 EDYPAISKW 210
+DYP + W
Sbjct: 194 DDYPKVKAW 202
>sp|P47496|DNLJ_MYCGE DNA LIGASE (EC 6.5.1.2) (POLYDEOXYRIBONUCLEOTIDE SYNTHASE
(NAD+)).
Length = 659
Score = 60 (27.7 bits), Expect = 4.7, P = 0.99
Identities = 10/42 (23%), Positives = 24/42 (57%)
Query: 147 ISQAYSSGEVKNQFDFVEGEISKNNGYLVDGKLSGADILMSF 188
+ A+S+ E+ N D + + + N ++V+ K+ G I +++
Sbjct: 82 LENAFSTKEIANFIDNINFQTNSKNEFVVEPKIDGVSISLTY 123
>sp|P32105|YIBF_ECOLI HYPOTHETICAL 22.6 KD PROTEIN IN SELA-RHSA INTERGENIC
REGION (F202).
Length = 202
Score = 42 (19.4 bits), Expect = 5.2, Sum P(3) = 0.99
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 152 SSGEVKNQFDFVEGEISKNNGYLVDGKL 179
S E+ Q + + + GYLVDG L
Sbjct: 119 SEDELLRQREKINRSLDVLEGYLVDGTL 146
Score = 38 (17.5 bits), Expect = 5.2, Sum P(3) = 0.99
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 41 FRAPPELKKIHPLGRSPLLEVQDRE 65
+ A + + +PLG+ P+L ++ E
Sbjct: 34 YNADNGVAQFNPLGKVPVLVTEEGE 58
Score = 35 (16.1 bits), Expect = 5.2, Sum P(3) = 0.99
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 203 DYPAISKWLKTITSEESYAASK 224
D P + K ++ + S ES+A ++
Sbjct: 177 DRPHLVKLVENLFSRESFARTE 198
>sp|P04907|GTH3_MAIZE GLUTATHIONE S-TRANSFERASE III (EC 2.5.1.18) (GST-III)
(CLASS PHI).
Length = 221
Score = 58 (26.7 bits), Expect = 7.7, P = 1.0
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 18 RLLWLLDHLNLEYEIVPYKRDANFRAPPELKKIHPLGRSPLL 59
R+ +L+ L++EIVP P+ ++P G+ P L
Sbjct: 16 RVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPAL 57
>sp|P46437|GTS_MUSDO GLUTATHIONE S-TRANSFERASE (EC 2.5.1.18) (CLASS-SIGMA).
Length = 241
Score = 48 (22.1 bits), Expect = 8.5, Sum P(2) = 1.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 45 PELKKIHPLGRSPLLEVQDR 64
P LK P+G+ P+LEV +
Sbjct: 78 PALKPTMPMGQMPVLEVNGK 97
Score = 41 (18.9 bits), Expect = 8.5, Sum P(2) = 1.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 163 VEGEISKNNGYLVDGKLSGADI 184
+E + N+G+L KL+ AD+
Sbjct: 171 LEQTVKDNDGHLALNKLTWADV 192
>sp|P54232|VEF_GVHA VIRAL ENHANCING FACTOR (VEF) (ENHANCIN) (104 KD
GLYCOPROTEIN) (SYNERGISTIC FACTOR).
Length = 902
Score = 48 (22.1 bits), Expect = 8.6, Sum P(2) = 1.0
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 14 SRAFRLLWLLDHLNLEYEIVPYKRDANFRAPPELKKIHPLGRSPLLEVQDRET 66
S FR L D + LE +IVP A+ R H + L V+ R+T
Sbjct: 741 SYLFRFRGLGDFMLLELQIVPILNLASVRVGNHHNGPHSYFNTTYLSVEVRDT 793
Score = 46 (21.2 bits), Expect = 8.6, Sum P(2) = 1.0
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 115 QPPLMIEFILSKVKDSGMPFPISYLARKVADKISQAYSSGEVKNQFDFV 163
+P ++ I++K D+ +P + AR A ++ S + + DFV
Sbjct: 830 EPGQRLQLIVNKTLDTALPNSQNIYARLTATQLVVGEQSIIISDDNDFV 878
Parameters:
V=500
B=250
-ctxfactor=1.00
E=10
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.401 same same same
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 234 234 10. 58 3 11 22 0.21 33
Statistics:
Query Expected Observed HSPs HSPs
Frame MatID High Score High Score Reportable Reported
+0 0 62 (28.6 bits) 1211 (558.4 bits) 27 27
Query Neighborhd Word Excluded Failed Successful Overlaps
Frame MatID Words Hits Hits Extensions Extensions Excluded
+0 0 5410 9968414 2047820 7904427 16162 13
Database: SWISS-PROT Release 34.0
Release date: October 1996
Posted date: 12:53 AM CDT Jun 4, 1997
# of letters in database: 21,210,388
# of sequences in database: 59,021
# of database sequences satisfying E: 13
No. of states in DFA: 552 (54 KB)
Total size of DFA: 112 KB (128 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Real: 00:00:00
No. of processors used: 2
Time to search database: 14.29u 0.08s 14.37t Real: 00:00:07
Total cpu time: 14.34u 0.09s 14.43t Real: 00:00:07
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